In a study of intra-observer variability in the assessment of cervical smears, 3341 slides were screened for the presence or absence of abnormal squamous cells. Each slide was screened by a particular observer and then re-screened six months later by the same observer. The results of this study are shown in Table 1.1 below.
Table 1.1: Cross tabulation of the results of the first and second screening
Second screening
Present
Absent
First
screening
Present
1764
498
Absent
412
667
Do these data support the null hypothesis that there is no association between time of screening and diagnosis? Briefly explain by carrying out an appropriate test.
To check the association among the screen timings and the time of diagnosis we will carry out a Chi-square test. On the basis of chi-square test we will conclude our test results for the accepting or rejecting our null hypothesis.
Test Hypothesis
: There is no association between timing of screening and diagnosis.
: There is association between timing of screening and diagnosis.
To obtain the chi-square statistics for the given table first we will generate the following table:
Second Screening
Present
Absent
First Screening
Present
1764
498
2264
Absent
412
667
1079
2176
1165
3341
The chi-square statistics used to conclude the test result were obtained by using the following formula:
The chi-square statistics obtained through the above formula is:
The p-value of the test, i.e. the significance level of the test appears to be 0.0001. Therefore, we can conclude that there is a strong association among the timings of screening and the diagnosis. Hence on the basis of our p-value we can finally accept our null hypothesis.
Question 2
A nested case-control study was conducted in the Hunter Region of NSW to examine whether patients who were current smokers of cigarettes had more complications after surgery than patients who were non-smokers. Tables 2.1 and 2.2 show the smoking status for cases (those with complications at the 6 week follow-up visit) and controls (those with no complications), separately by hospital.
Table 2.1: Count of the number of complications among smokers and non-smokers at Hospital 1
Hospital 1
Complication
Present
Absent
Smoking status
Smoker
42
22
Non-smoker
85
62
Table 2.2: Count of the number of complications among smokers and non-smokers at Hospital 2
Hospital 2
Complication
Present
Absent
Smoking status
Smoker
254
348
Non-smoker
96
172
(a)Estimate the odds of being a smoker among patients who had a complication at 6 weeks and who had their surgery performed at Hospital 1.
Through the results of SPSS, the odds ratio of being a smoker who had a complication at six weeks and also had a surgery among the patients of hospital 1 can be given as:
Risk Estimate
Value
95% Confidence Interval
Lower
Upper
Odds Ratio for Smokingstatus (non-smoker / Smoker)
1.393
.756
2.565
For cohort Complication = Absent
1.227
.833
1.808
For cohort Complication = Present
.881
.704
1.103
N of Valid Cases
211
Therefore, form the above table we can conclude that the odds ratio for being a smoker among those who had complication at six weeks and also had a surgery in hospital 1 is .881
(b) Estimate the odds of being a smoker among patients who DID NOT have a complication at 6 weeks and who had their surgery performed at Hospital 1.
From the above table, the odds ratio of being a smoker who did not had a complication at six weeks and had a surgery among the patients ...